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These pictures show BACs in the
03-15-2009
pseudogenome build
Mt3.0:
To get your own pictures:
- To display other sets of BACs on the current
build, use the
CViT-BACs.
- To query the location of nucleotide or amino
acid sequencess in the build, use the
CViT-Blast.
Note:
BAC borders are shown on chromosomes. BAC and contig order has been determined
using evidence in this
order of preference: marker, then sequence overlap, then BAC end overlap (with at least 99%
identity over 90% of length, and only for low-copy BAC end matches), then
physical (FPC) map. In some cases, strong homology with sequenced regions of
soybean has also been used. Contigs and supercontigs have also been ordered
where possible, using marker information. The MtChr0 "chromosome" consists of
unordered BACs and sequence contigs whose positions have not yet been determined.
BACs By Sequencing Center
Shows BACs sequenced by center:
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University of Oklahoma |
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TIGR |
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Genoscope |
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Sanger Institute |
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"Other" |

Mapped BACs
BAC borders are shown on chromosomes. Light gray indicates BAC borders that are
inside contigs; black BACs are on edges of contigs. The lines between BACs indicate
gaps of unknown length.
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BACs mapping to one chromosome |
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BACs mapping to multiple chromosomes |

Phase 1, 2, and 3 BACs
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Phase 1 BACs (unordered pieces) |
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Phase 2 BACs (ordered and oriented pieces) |
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Phase 3 BACs (complete) |

Medicago Baby Picture
(actually Medicago lupinula; courtesy of PNW Weed Management Handbook).
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